Movies

makeMovie uses the PhysiCell Makefile to turn a simulation's SVG snapshots into output/out.mp4, deleting the intermediate JPEGs afterward. It requires ImageMagick and FFmpeg to be discoverable — on PATH, via PCMM_IMAGEMAGICK_PATH/PCMM_FFMPEG_PATH, or passed directly as magick_path/ffmpeg_path.

makeMovie(1)                # simulation 1 -> output/out.mp4
makeMovie(sampling)         # every simulation in a trial
makeMovie(out)              # every simulation in a `run` result
makeMovie(4:7)              # a range/vector of simulation IDs
makeMovie(Simulation.(4:7)) # a vector of trials

The Makefile's own animation variables are exposed as keyword arguments. Omit any of them to keep that Makefile's default:

makeMovie(1; framerate=10, magick_density=48, magick_resize_x=512, magick_resize_y=512)