ModelManagerStudio
Documentation for ModelManagerStudio.
ModelManagerStudio.get_pcmm_pathsModelManagerStudio.init_model_manager_guiModelManagerStudio.launchModelManagerStudio.mainModelManagerStudio.studio_initialize_model_manager
ModelManagerStudio.get_pcmm_paths — Method
get_pcmm_paths(args::Vararg{AbstractString})Get the PhysiCell and data directories from the provided arguments. See launch for details on how the arguments are interpreted.
ModelManagerStudio.init_model_manager_gui — Method
init_model_manager_gui(args::Vararg{AbstractString}; kwargs...)Internal function to initialize the Model Manager GUI with the specified arguments. Called by launch.
ModelManagerStudio.launch — Method
launch()
launch(path_to_project::AbstractString)
launch(physicell_dir::AbstractString, data_dir::AbstractString)Launch the Model Manager Studio GUI for a particular project.
If no arguments are provided, it will initialize the Model Manager within the current working directory, i.e., using data_dir = "./data" and physicell_dir = "./PhysiCell". If a single argument is provided, it will use that as the base directory and append data and PhysiCell to it, i.e., data_dir = "$(path_to_project)/data" and physicell_dir = "$(path_to_project)/PhysiCell". If two arguments are provided, they will be used as the physicell_dir and data_dir, respectively.
Examples
using ModelManagerStudio
launch() # Launches with default paths in the current directory, i.e., `data_dir = "./data"` and `physicell_dir = "./PhysiCell"`
launch("path/to/project") # Launches with specified project path (will ask if paths differ)
launch("path/to/PhysiCell", "path/to/data") # Launches with specified PhysiCell and data directoriesModelManagerStudio.main — Method
main(args)Entry point for ModelManagerStudio application. Calls launch to start the application. See launch for argument details.
ModelManagerStudio.studio_initialize_model_manager — Method
studio_initialize_model_manager(args::Vararg{AbstractString})Internal function to initialize the Model Manager with the specified arguments. Called by init_model_manager_gui.